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SABIO-RK: A data warehouse for biochemical reactions and their kinetics

Krebs, Olga ; Golebiewski, Martin ; Kania, Renate ; Mir, Saqib ; Saric, Jasmin ; Weidemann, Andreas ; Wittig, Ulrike ; Rojas, Isabel

Journal of Integrative Bioinformatics - JIB (ISSN 1613-4516)


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Abstract:
Systems biology is an emerging field that aims at obtaining a system-level understanding of biological processes. The modelling and simulation of networks of biochemical reactions have great and promising application potential but require reliable kinetic data. In order to support the systems biology community with such data we have developed SABIO-RK (System for the Analysis of biochemical Pathways - Reaction Kinetics), a curated database with information about biochemical reactions and their kinetic properties, which allows researchers to obtain and compare kinetic data and to integrate them into models of biochemical networks. SABIO-RK is freely available for academic use at http://sabio.villa-bosch.de/SABIORK/.


Institution: Faculty of Technology, Research Groups in Informatics
DDC classification: Data processing, computer science, computer systems

Suggested Citation:
Krebs, Olga ; Golebiewski, Martin ; Kania, Renate ; Mir, Saqib ; Saric, Jasmin ; Weidemann, Andreas ; Wittig, Ulrike ; Rojas, Isabel  (2007)  SABIO-RK: A data warehouse for biochemical reactions and their kinetics. Journal of Integrative Bioinformatics - JIB (ISSN 1613-4516), 4(1), 2007. Special Issue: Data Warehouse Technologies in Bioinformatics, Wittenberg, Germany, 2006

Online-Journal: http://journal.imbio.de/index.php?paper_id=49
URL: http://biecoll.ub.uni-bielefeld.de/volltexte/2007/230



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