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Analysis of high-throughput plant image data with the information system IAP

Klukas, Christian ; Pape, Jean-Michel ; Entzian, Alexander

Journal of Integrative Bioinformatics - JIB (ISSN 1613-4516)


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Abstract:
This work presents a sophisticated information system, the Integrated Analysis Platform (IAP), an approach supporting large-scale image analysis for different species and imaging systems. In its current form, IAP supports the investigation of Maize, Barley and Arabidopsis plants based on images obtained in different spectra. Several components of the IAP system, which are described in this work, cover the complete end-to-end pipeline, starting with the image transfer from the imaging infrastructure, (grid distributed) image analysis, data management for raw data and analysis results, to the automated generation of experiment reports.


Institution: Faculty of Technology, Research Groups in Informatics
DDC classification: Data processing, computer science, computer systems

Suggested Citation:
Analysis of high-throughput plant image data with the information system IAP. Journal of Integrative Bioinformatics - JIB (ISSN 1613-4516), 9(2): Special Issue: 7th International Symposium on Integrative Bioinformatics, Hangzhou, China, 2012

Online-Journal: http://journal.imbio.de/article.php?aid=191
URL: http://biecoll.ub.uni-bielefeld.de/volltexte/2012/5219



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